After a lot of trouble to install build everything with rosdep and brew, I got this error when trying to run: ./src/catkin/bin/catkin_make_isolated --install
-- Using CATKIN_DEVEL_PREFIX: /Users/bruno/ros_catkin_ws/devel_isolated/catkin
-- Using CMAKE_PREFIX_PATH:
-- Using default Python package layout
-- Using CATKIN_ENABLE_TESTING: ON
-- Call enable_testing()
-- Using CATKIN_TEST_RESULTS_DIR: /Users/bruno/ros_catkin_ws/build_isolated/catkin/test_results
-- Found gtest: gtests will be built
-- catkin 0.5.77
/usr/bin/python: can't find '__main__' module in '/Library/Python/2.7/site-packages/empy-3.1-py2.7.egg/em.pyc'
CMake Error at cmake/safe_execute_process.cmake:11 (message):
execute_process(/Users/bruno/ros_catkin_ws/build_isolated/catkin/catkin_generated/env_cached.sh
"/usr/bin/python"
"/Library/Python/2.7/site-packages/empy-3.1-py2.7.egg/em.pyc"
"--raw-errors" "-F"
"/Users/bruno/ros_catkin_ws/build_isolated/catkin/catkin_generated/pkg.develspace.context.pc.py"
"-o"
"/Users/bruno/ros_catkin_ws/devel_isolated/catkin/lib/pkgconfig/catkin.pc"
"/Users/bruno/ros_catkin_ws/src/catkin/cmake/em/pkg.pc.em") returned error
code 1
Call Stack (most recent call first):
cmake/em_expand.cmake:23 (safe_execute_process)
cmake/catkin_package.cmake:358 (em_expand)
cmake/catkin_package.cmake:98 (_catkin_package)
CMakeLists.txt:11 (catkin_package)
-- Configuring incomplete, errors occurred!
See also "/Users/bruno/ros_catkin_ws/build_isolated/catkin/CMakeFiles/CMakeOutput.log".
ls -l /usr/local//lib/python2.7/site-packages/
drwxr-xr-x 7 bruno admin 238 23 Out 09:13 GDAL-1.10.1-py2.7.egg-info
drwxr-xr-x 26 bruno admin 884 13 Nov 11:26 PyQt4
drwxr-xr-x 21 bruno admin 714 13 Nov 01:31 PySide
drwxr-xr-x 7 bruno admin 238 10 Nov 09:20 VTK-5.10.1-py2.7.egg-info
lrwxr-xr-x 1 bruno admin 64 5 Nov 00:22 cv.py -> ../../../Cellar/opencv/2.4.6.1/lib/python2.7/site-packages/cv.py
lrwxr-xr-x 1 bruno admin 65 5 Nov 00:22 cv2.so -> ../../../Cellar/opencv/2.4.6.1/lib/python2.7/site-packages/cv2.so
-rw-r--r-- 1 bruno admin 236 13 Nov 22:14 easy-install.pth
-rw-r--r-- 1 root admin 114277 27 Out 2003 em.py
-rw-r--r-- 1 root admin 131548 13 Nov 22:37 em.pyc
-rw-r--r-- 1 root admin 1165 13 Nov 22:37 empy-3.1-py2.7.egg-info
lrwxr-xr-x 1 bruno admin 63 23 Out 09:13 gdal.py -> ../../../Cellar/gdal/1.10.1/lib/python2.7/site-packages/gdal.py
lrwxr-xr-x 1 bruno admin 68 23 Out 09:13 gdalconst.py -> ../../../Cellar/gdal/1.10.1/lib/python2.7/site-packages/gdalconst.py
lrwxr-xr-x 1 bruno admin 70 23 Out 09:13 gdalnumeric.py -> ../../../Cellar/gdal/1.10.1/lib/python2.7/site-packages/gdalnumeric.py
drwxr-xr-x 5 bruno admin 170 10 Nov 21:09 git_remote_helpers
lrwxr-xr-x 1 bruno admin 95 10 Nov 21:09 git_remote_helpers-0.1.0-py2.7.egg-info -> ../../../Cellar/git/1.8.4.3/lib/python2.7/site-packages/git_remote_helpers-0.1.0-py2.7.egg-info
drwxr-xr-x 40 bruno admin 1360 12 Nov 22:03 hgext
drwxr-xr-x 105 bruno admin 3570 12 Nov 22:03 mercurial
lrwxr-xr-x 1 bruno admin 86 12 Nov 22:03 mercurial-2.8-py2.7.egg-info -> ../../../Cellar/mercurial/2.8/lib/python2.7/site-packages/mercurial-2.8-py2.7.egg-info
lrwxr-xr-x 1 bruno admin 62 23 Out 09:13 ogr.py -> ../../../Cellar/gdal/1.10.1/lib/python2.7/site-packages/ogr.py
drwxr-xr-x 14 bruno admin 476 23 Out 09:13 osgeo
lrwxr-xr-x 1 bruno admin 62 23 Out 09:13 osr.py -> ../../../Cellar/gdal/1.10.1/lib/python2.7/site-packages/osr.py
drwxr-xr-x 4 bruno admin 136 13 Nov 22:14 pip-1.4.1-py2.7.egg
-rw-r--r-- 1 bruno admin 503884 13 Nov 22:14 setuptools-1.3.2-py2.7.egg
-rw-r--r-- 1 bruno admin 29 13 Nov 22:14 setuptools.pth
lrwxr-xr-x 1 bruno admin 70 13 Nov 01:21 shiboken.so -> ../../../Cellar/shiboken/1.2.0/lib/python2.7/site-packages/shiboken.so
lrwxr-xr-x 1 bruno admin 61 10 Nov 21:57 sip.so -> ../../../Cellar/sip/4.15.3/lib/python2.7/site-packages/sip.so
lrwxr-xr-x 1 bruno admin 67 10 Nov 21:57 sipconfig.py -> ../../../Cellar/sip/4.15.3/lib/python2.7/site-packages/sipconfig.py
-r--r--r-- 1 bruno admin 72957 10 Nov 21:58 sipconfig.pyc
lrwxr-xr-x 1 bruno admin 70 10 Nov 21:57 sipdistutils.py -> ../../../Cellar/sip/4.15.3/lib/python2.7/site-packages/sipdistutils.py
-rw-r--r-- 1 bruno admin 2418 13 Nov 18:27 site.py
-rw-r--r-- 1 bruno admin 1739 13 Nov 18:27 site.pyc
-rw-r--r-- 1 bruno admin 2535 13 Nov 22:14 sitecustomize.py
-rw-r--r-- 1 bruno admin 1174 13 Nov 22:14 sitecustomize.pyc
drwxr-xr-x 44 bruno admin 1496 10 Nov 09:20 vtk
ls -l /Library/Python/2.7/site-packages/
total 2616
drwxr-xr-x 14 root wheel 476 5 Nov 00:11 Crypto
drwxr-xr-x 9 root wheel 306 25 Out 09:52 Flask-0.10.1-py2.7.egg-info
drwxr-xr-x 9 root wheel 306 25 Out 09:54 Flask_SQLAlchemy-1.0-py2.7.egg-info
-rw-r--r-- 1 root wheel 4930 24 Out 15:18 HermesClient-1.0.0-py2.7.egg
drwxr-xr-x 10 root wheel 340 25 Out 09:52 Jinja2-2.7.1-py2.7.egg-info
drwxr-xr-x 8 root wheel 272 25 Out 09:52 MarkupSafe-0.18-py2.7.egg-info
drwxr-xr-x 7 root wheel 238 24 Out 15:09 MySQL_python-1.2.4-py2.7.egg-info
drwxr-xr-x 15 root wheel 510 24 Out 15:09 MySQLdb
drwxr-xr-x 47 root wheel 1598 10 Nov 18:11 OpenGL
drwxr-xr-x 167 root wheel 5678 29 Out 17:00 PIL
-rw-r--r-- 1 root wheel 4 29 Out 17:00 PIL.pth
drwxr-xr-x 7 root wheel 238 10 Nov 18:11 PyOpenGL-3.0.2-py2.7.egg-info
drwxr-xr-x 10 root wheel 340 24 Out 15:09 PySQLPool
drwxr-xr-x 7 root wheel 238 24 Out 15:09 PySQLPool-0.3.7-py2.7.egg-info
drwxr-xr-x 7 root wheel 238 29 Out 01:54 PyYAML-3.10-py2.7.egg-info
drwxr-xr-x 9 root wheel 306 10 Nov 17:17 Pygments-1.6-py2.7.egg-info
-rw-r--r-- 1 root wheel 119 22 Out 19:39 README
drwxr-xr-x 7 root wheel 238 25 Out 09:54 SQLAlchemy-0.8.2-py2.7.egg-info
drwxr-xr-x 10 root wheel 340 10 Nov 17:17 Sphinx-1.1.3-py2.7.egg-info
drwxr-xr-x 8 root wheel 272 24 Out 15:05 Werkzeug-0.9.4-py2.7.egg-info
drwxr-xr-x 6 root wheel 204 13 Nov 01:04 _markerlib
-rwxr-xr-x 1 root wheel 130440 24 Out 15:09 _mysql.so
-rw-r--r-- 1 root wheel 2352 24 Out 15:09 _mysql_exceptions.py
-rw-r--r-- 1 root wheel 4243 24 Out 15:09 _mysql_exceptions.pyc
-rwxr-xr-x 1 root wheel 79720 13 Nov 00:05 _psutil_osx.so
-rwxr-xr-x 1 root wheel 25840 13 Nov 00:05 _psutil_posix.so
drwxr-xr-x 7 root wheel 238 29 Out 01:54 argparse-1.2.1-py2.7.egg-info
-rw-r--r-- 1 root wheel 87791 29 Out 01:53 argparse.py
-rw-r--r-- 1 root wheel 65903 29 Out 01:54 argparse.pyc
drwxr-xr-x 31 root wheel 1054 13 Nov 17:44 catkin_pkg
drwxr-xr-x 8 root wheel 272 13 Nov 17:44 catkin_pkg-0.1.23-py2.7.egg-info
drwxr-xr-x 17 root wheel 578 13 Nov 17:44 dateutil
drwxr-xr-x 9 root wheel 306 29 Out 01:54 distribute-0.7.3-py2.7.egg-info
drwxr-xr-x 24 root wheel 816 29 Out 01:54 docutils
drwxr-xr-x 7 root wheel 238 29 Out 01:54 docutils-0.11-py2.7.egg-info
-rw-r--r-- 1 root wheel 15267 13 Nov 01:04 dot_parser.py
-rw-r--r-- 1 root wheel 13450 13 Nov 01:04 dot_parser.pyc
-rw-r--r-- 1 root wheel 332 13 Nov 23:45 easy-install.pth
-rw-r--r-- 1 root wheel 126 13 Nov 01:04 easy_install.py
-rw-r--r-- 1 root wheel 316 13 Nov 01:04 easy_install.pyc
drwxr-xr-x 26 root wheel 884 5 Nov 00:11 ecdsa
drwxr-xr-x 7 root wheel 238 5 Nov 00:11 ecdsa-0.10-py2.7.egg-info
-rw-r--r-- 1 root wheel 69736 13 Nov 23:45 empy-3.1-py2.7.egg
drwxr-xr-x 29 root wheel 986 29 Out 11:23 epydoc
drwxr-xr-x 7 root wheel 238 29 Out 11:23 epydoc-3.0.1-py2.7.egg-info
drwxr-xr-x 42 root wheel 1428 25 Out 09:52 flask
drwxr-xr-x 6 root wheel 204 25 Out 09:54 flask_sqlalchemy
drwxr-xr-x 5 root wheel 170 24 Out 11:50 ipython-1.1.0-py2.7.egg
drwxr-xr-x 8 root wheel 272 25 Out 09:52 itsdangerous-0.23-py2.7.egg-info
-rw-r--r-- 1 root wheel 30509 25 Out 09:52 itsdangerous.py
-rw-r--r-- 1 root wheel 33149 25 Out 09:52 itsdangerous.pyc
drwxr-xr-x 49 root wheel 1666 25 Out 09:52 jinja2
drwxr-xr-x 16 root wheel 544 13 Nov 01:41 kitchen
drwxr-xr-x 7 root wheel 238 13 Nov 01:41 kitchen-1.1.1-py2.7.egg-info
drwxr-xr-x 14 root wheel 476 25 Out 09:52 markupsafe
drwxr-xr-x 7 root wheel 238 5 Nov 00:11 netifaces-0.8-py2.7.egg-info
-rwxr-xr-x 1 root wheel 35256 5 Nov 00:11 netifaces.so
drwxr-xr-x 43 root wheel 1462 29 Out 17:00 nose
drwxr-xr-x 9 root wheel 306 29 Out 17:00 nose-1.3.0-py2.7.egg-info
drwxr-xr-x 38 root wheel 1292 24 Out 15:03 numpy
drwxr-xr-x 7 root wheel 238 24 Out 15:03 numpy-1.7.1-py2.7.egg-info
drwxr-xr-x 78 root wheel 2652 5 Nov 00:11 paramiko
drwxr-xr-x 8 root wheel 272 5 Nov 00:11 paramiko-1.12.0-py2.7.egg-info
drwxr-xr-x 4 root wheel 136 24 Out 11:45 pip-1.4.1-py2.7.egg
-rw-r--r-- 1 root wheel 101430 13 Nov 01:04 pkg_resources.py
-rw-r--r-- 1 root wheel 108963 13 Nov 01:04 pkg_resources.pyc
drwxr-xr-x 24 root wheel 816 13 Nov 00:05 psutil
drwxr-xr-x 7 root wheel 238 13 Nov 00:05 psutil-1.1.3-py2.7.egg-info
drwxr-xr-x 7 root wheel 238 5 Nov 00:11 pycrypto-2.6.1-py2.7.egg-info
drwxr-xr-x 8 root wheel 272 13 Nov 01:04 pydot-1.0.28-py2.7.egg-info
-rw-r--r-- 1 root wheel 61340 13 Nov 01:04 pydot.py
-rw-r--r-- 1 root wheel 54875 13 Nov 01:04 pydot.pyc
drwxr-xr-x 30 root wheel 1020 10 Nov 17:17 pygments
drwxr-xr-x 7 root wheel 238 13 Nov 01:04 pyparsing-2.0.1-py2.7.egg-info
-rw-r--r-- 1 root wheel 154099 13 Nov 01:04 pyparsing.py
-rw-r--r-- 1 root wheel 151456 13 Nov 01:04 pyparsing.pyc
drwxr-xr-x 9 root wheel 306 13 Nov 17:44 python_dateutil-2.2-py2.7.egg-info
drwxr-xr-x 6 root wheel 204 24 Out 11:56 readline-6.2.4.1-py2.7-macosx-10.7-intel.egg
drwxr-xr-x 32 root wheel 1088 24 Out 15:01 requests
drwxr-xr-x 8 root wheel 272 24 Out 15:01 requests-2.0.1-py2.7.egg-info
drwxr-xr-x 8 root wheel 272 29 Out 02:00 rosdep-0.10.23-py2.7.egg-info
drwxr-xr-x 37 root wheel 1258 29 Out 02:00 rosdep2
drwxr-xr-x 54 root wheel 1836 29 Out 01:54 rosdistro
drwxr-xr-x 8 root wheel 272 29 Out 01:54 rosdistro-0.2.15-py2.7.egg-info
drwxr-xr-x 40 root wheel 1360 29 Out 01:54 rosinstall
drwxr-xr-x 8 root wheel 272 29 Out 01:54 rosinstall-0.6.30-py2.7.egg-info
drwxr-xr-x 10 root wheel 340 29 Out 02:00 rosinstall_generator
drwxr-xr-x 8 root wheel 272 29 Out 02:00 rosinstall_generator-0.1.4-py2.7.egg-info
drwxr-xr-x 20 root wheel 680 13 Nov 17:42 rospkg
drwxr-xr-x 7 root wheel 238 29 Out 01:54 rospkg-1.0.24-py2.7.egg-info
drwxr-xr-x 39 root wheel 1326 13 Nov 01:04 setuptools
drwxr-xr-x 10 root wheel 340 13 Nov 01:04 setuptools-1.3.2-py2.7.egg-info
drwxr-xr-x 18 root wheel 612 13 Nov 11:47 simplejson
drwxr-xr-x 7 root wheel 238 13 Nov 11:47 simplejson-3.3.1-py2.7.egg-info
drwxr-xr-x 7 root wheel 238 29 Out 01:54 six-1.4.1-py2.7.egg-info
-rw-r--r-- 1 root wheel 20588 29 Out 01:53 six.py
-rw-r--r-- 1 root wheel 20619 29 Out 01:54 six.pyc
drwxr-xr-x 46 root wheel 1564 10 Nov 17:17 sphinx
drwxr-xr-x 36 root wheel 1224 25 Out 09:54 sqlalchemy
drwxr-xr-x 22 root wheel 748 29 Out 01:54 vcstools
drwxr-xr-x 8 root wheel 272 29 Out 01:54 vcstools-0.1.32-py2.7.egg-info
drwxr-xr-x 45 root wheel 1530 24 Out 15:05 werkzeug
drwxr-xr-x 8 root wheel 272 29 Out 01:54 wstool
drwxr-xr-x 8 root wheel 272 29 Out 01:54 wstool-0.0.4-py2.7.egg-info
drwxr-xr-x 36 root wheel 1224 29 Out 01:54 yaml
Originally posted by Bruno Normande on ROS Answers with karma: 35 on 2013-11-13
Post score: 2
Original comments
Comment by Artem on 2013-11-13:
Are you on OSX 10.8? What package is this?
Comment by Artem on 2013-11-13:
Have you seen this answer? http://answers.ros.org/question/36130/osx-fuerte-rosdep-install-a-fails-on-pcl/
Comment by Bruno Normande on 2013-11-13:
OSX 10.9, and I'm not installing catkin with brew, but with the command ./src/catkin/bin/catkin_make_isolated --install. I followed all steps in http://wiki.ros.org/hydro/Installation/OSX/Homebrew/Source
Comment by Artem on 2013-11-13:
Hmm looks like some python dependencies problem. Try to do this command again and carefully check that there were no errors. sudo pip install -U wstool rosdep rosinstall rosinstall_generator rospkg catkin-pig Distribute
Comment by Bruno Normande on 2013-11-13:
Everything reinstalled, without errors, but still same problem (I'm assuming you miss-typed catkin-pkg). It says that can't find main in empty, but i just tested the package and seems all right... :(
Comment by Artem on 2013-11-13:
What does which python say?
Comment by Artem on 2013-11-13:
Make sure that you are using python 2.7.5 that you installed with homebrew and not the system python.
Comment by Artem on 2013-11-13:
Can you execute ls -l /usr/local//lib/python2.7/site-packages/
Comment by Bruno Normande on 2013-11-13:
Just brewed python, the problem continues. Adding the result of ls in the question. I think maybe i have to clean everything up and start again from scratch, the upgrade from 10.8 to 10.9 broke a lot of things...